Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443562 Ptep1.0/2.0 NW_024969773.1 929353 1039721 - integrin alpha-PS1 aug3.g474,aug3.g20575,aug3.g473 LOC107443562 0
LOC107452393 Ptep1.0/2.0 NW_024970325.1 299929 340910 - uncharacterized LOC107452393 aug3.g4741,aug3.g4739 LOC107452393,LOC107452392 0
LOC107452416 Ptep1.0/2.0 NW_024971162.1 77438 99597 - protein O-mannosyl-transferase 2 aug3.g4745 LOC107452041,LOC107452416 0
LOC107455680 Ptep1.0/2.0 NW_024971567.1 16201 45196 + uncharacterized LOC107455680 aug3.g8784,aug3.g8308,aug3.g7950,aug3.g4746,aug3.g19246,aug3.g11958,aug3.g4606 LOC107455680 0
LOC122272631 Ptep1.0/2.0 NW_024972407.1 1847 3630 - uncharacterized LOC122272631 aug3.g4742 NA 1e-160
LOC122268446 Ptep1.0/2.0 NW_024974439.1 4 20580 - protein O-mannosyl-transferase 2-like aug3.g4745 NA 0
LOC107452411 Ptep1.0/2.0 NW_024974439.1 33348 40193 + oocyte zinc finger protein XlCOF6.1 aug3.g4744 LOC107452411 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02