Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440055 Ptep1.0/2.0 NW_024969654.1 1493417 1515844 - nephrocystin-1 aug3.g4947,aug3.g4946,aug3.g9704 LOC107440055 0
LOC107452729 Ptep1.0/2.0 NW_024969654.1 1515905 1521325 + peptidyl-prolyl cis-trans isomerase FKBP12 aug3.g4945 LOC107452729 0
LOC107452728 Ptep1.0/2.0 NW_024969654.1 1521316 1533505 - galactokinase aug3.g4944 LOC107452728 0
LOC107452721 Ptep1.0/2.0 NW_024969654.1 1533715 1552334 + dynein beta chain, ciliary aug3.g4943 LOC107452721 0
LOC107452731 Ptep1.0/2.0 NW_024969654.1 1554326 1563662 + dynein axonemal heavy chain 11 aug3.g4943 LOC107452731 0
LOC107452732 Ptep1.0/2.0 NW_024969654.1 1563591 1582199 - rho GDP-dissociation inhibitor 2 aug3.g4942 LOC107452732 0
LOC107452720 Ptep1.0/2.0 NW_024969654.1 1572464 1592665 + NADPH:adrenodoxin oxidoreductase, mitochondrial aug3.g4941 LOC107452720 0
LOC107452725 Ptep1.0/2.0 NW_024969654.1 1594411 1730041 - caskin-1 aug3.g4940 LOC107452725 0
LOC107443661 Ptep1.0/2.0 NW_024969754.1 1128884 1260404 + toll-like receptor 6 aug3.g494 LOC107443661 0
LOC107452754 Ptep1.0/2.0 NW_024969963.1 171115 208345 + uncharacterized LOC107452754 aug3.g4948 LOC107452754 0
LOC107452759 Ptep1.0/2.0 NW_024969963.1 232686 281841 - DNA polymerase alpha catalytic subunit aug3.g4949,aug3.g24390 LOC107438778,LOC107452759,LOC107446483 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02