Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC110283596 Ptep1.0/2.0 NW_024969628.1 1520191 1523020 - craniofacial development protein 2-like aug3.g5038 LOC110283596 0
LOC107452867 Ptep1.0/2.0 NW_024969697.1 74286 86443 + uncharacterized LOC107452867 aug3.g5037 LOC107452867 0
LOC107452863 Ptep1.0/2.0 NW_024969697.1 122591 147484 + uncharacterized LOC107452863 aug3.g5034 LOC107452863 0
LOC107443689 Ptep1.0/2.0 NW_024969801.1 576258 623499 + protein FAM135A aug3.g503 LOC107443689 0
LOC107445617 Ptep1.0/2.0 NW_024969914.1 839434 1002125 + hypoxia-inducible factor 1-alpha aug3.g18646,aug3.g5039 LOC107452880,LOC107445617 0
LOC122270454 Ptep1.0/2.0 NW_024970189.1 284087 287511 + uncharacterized LOC122270454 aug3.g5030 NA 6e-134
LOC122270592 Ptep1.0/2.0 NW_024970265.1 380425 383849 - uncharacterized LOC122270592 aug3.g5030 NA 6e-134
LOC122270695 Ptep1.0/2.0 NW_024970320.1 873645 878014 + uncharacterized LOC122270695 aug3.g5030 NA 0
LOC107452856 Ptep1.0/2.0 NW_024970660.1 16423 78590 - nephrin aug3.g5032 LOC107452856 0
LOC110283419 Ptep1.0/2.0 NW_024972505.1 10647 12050 - uncharacterized LOC110283419 aug3.g3617,aug3.g5030 LOC110283419 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02