Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452944 Ptep1.0/2.0 NW_024969661.1 1539817 1553663 - prolyl 3-hydroxylase OGFOD1 aug3.g5091 LOC107452944 0
LOC107452949 Ptep1.0/2.0 NW_024969661.1 1558847 1566974 - uncharacterized LOC107452949 aug3.g5092 LOC107452949 0
LOC107443695 Ptep1.0/2.0 NW_024969801.1 1168793 1221602 - protein Lilipod aug3.g509 LOC107443695 0
LOC110282503 Ptep1.0/2.0 NW_024970365.1 171457 182919 + cytochrome P450 2J2-like aug3.g5098 LOC110282503 0
LOC107452943 Ptep1.0/2.0 NW_024970365.1 197427 235314 + uncharacterized LOC107452943 aug3.g5098,aug3.g5097,aug3.g5099 LOC107452943,LOC107452942 0
LOC107452946 Ptep1.0/2.0 NW_024970365.1 278061 291893 + uncharacterized LOC107452946 aug3.g5095 LOC107452946 0
LOC122270777 Ptep1.0/2.0 NW_024970365.1 338874 346848 + extensin-2-like aug3.g5094 NA 0
LOC107452932 Ptep1.0/2.0 NW_024970365.1 353768 354661 + repetitive proline-rich cell wall protein-like aug3.g5094 LOC107452932 0
LOC107452931 Ptep1.0/2.0 NW_024970365.1 363652 388886 - uncharacterized LOC107452931 aug3.g5093 LOC107452931 0
LOC107452930 Ptep1.0/2.0 NW_024971977.1 5508 23478 + uncharacterized LOC107452930 aug3.g5093 LOC107452930 0
LOC122272421 Ptep1.0/2.0 NW_024971977.1 24781 39692 + uncharacterized LOC122272421 aug3.g5093 LOC107452931 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02