Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453141 Ptep1.0/2.0 NW_024969836.1 981992 982762 - uncharacterized LOC107453141 aug3.g5245 LOC107453141 0
LOC107453146 Ptep1.0/2.0 NW_024969836.1 1093132 1167081 - multidrug resistance-associated protein 1 aug3.g5246 LOC107453146 0
LOC107453149 Ptep1.0/2.0 NW_024969836.1 1178273 1224562 - multidrug resistance-associated protein 1 aug3.g5248,aug3.g5247 LOC107453149 0
LOC107453147 Ptep1.0/2.0 NW_024969836.1 1240166 1264697 - stAR-related lipid transfer protein 7, mitochondrial aug3.g5249 LOC107453147 0
LOC107443760 Ptep1.0/2.0 NW_024969942.1 1166869 1193401 + mitogen-activated protein kinase kinase kinase 13 aug3.g524 LOC107443760 0
LOC122270089 Ptep1.0/2.0 NW_024970045.1 555377 556147 - uncharacterized LOC122270089 aug3.g5245 NA 0
LOC107453137 Ptep1.0/2.0 NW_024970849.1 19517 249759 - twitchin aug3.g5242 LOC107453137 0
LOC107453136 Ptep1.0/2.0 NW_024970849.1 258386 314894 - telokin aug3.g5242 LOC107453136 0
LOC107453134 Ptep1.0/2.0 NW_024970849.1 338607 368539 + uncharacterized protein CG3556-like aug3.g5241 LOC107453134 0
LOC107453128 Ptep1.0/2.0 NW_024971852.1 40732 41310 + cyclin-dependent kinase-like 4 aug3.g5240 LOC107453128 0
LOC107453130 Ptep1.0/2.0 NW_024971852.1 42156 45803 + uncharacterized LOC107453130 aug3.g5240 LOC107453130 0
LOC107436915 Ptep1.0/2.0 NW_024972270.1 3714 8048 - cyclin-dependent kinase-like 4 aug3.g11923,aug3.g10790,aug3.g2348,aug3.g5240,aug3.g10289,aug3.g21119,aug3.g1614,aug3.g13895,aug3.g13894 LOC107436915 0
LOC122274057 Ptep1.0/2.0 NW_024989717.1 108 1009 + uncharacterized LOC122274057 aug3.g5248 NA 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02