Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439940 Ptep1.0/2.0 NW_024969605.1 261912 263215 + gastrula zinc finger protein xLCGF3.1-like aug3.g5260 LOC107439940 0.0000000003
LOC107453166 Ptep1.0/2.0 NW_024969711.1 1111229 1123147 - omega-amidase NIT2 aug3.g5260 LOC107453166 7e-175
LOC107453165 Ptep1.0/2.0 NW_024969711.1 1123374 1127447 + gastrula zinc finger protein XlCGF26.1 aug3.g5260 LOC107453165 2e-37
LOC110283086 Ptep1.0/2.0 NW_024969781.1 1390038 1403178 + zinc finger protein 91 aug3.g5260 LOC110283086 0.000000000002
LOC107452969 Ptep1.0/2.0 NW_024971036.1 66656 68964 - zinc finger protein 525-like aug3.g5260 LOC107452969 0.0000002
LOC122273849 Ptep1.0/2.0 NW_024981617.1 29 1588 - gastrula zinc finger protein XlCGF8.2DB-like aug3.g5260 NA 7e-38
LOC122273848 Ptep1.0/2.0 NW_024981617.1 1665 2013 - gastrula zinc finger protein XlCGF49.1-like aug3.g5260 NA 3e-35
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02