Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453411 Ptep1.0/2.0 NW_024969600.1 586296 912380 - uncharacterized LOC107453411 aug3.g5471 LOC107453411 0
LOC107448481 Ptep1.0/2.0 NW_024969600.1 939995 984792 - uncharacterized LOC107448481 aug3.g2244,aug3.g5472 LOC107448481 0
LOC107448056 Ptep1.0/2.0 NW_024969602.1 68149 112670 - protein henna aug3.g2037,aug3.g5473 LOC107448056 0
LOC122269140 Ptep1.0/2.0 NW_024969747.1 6966 8009 + uncharacterized LOC122269140 aug3.g5474 NA 0
LOC107453428 Ptep1.0/2.0 NW_024969747.1 41531 49179 + uncharacterized LOC107453428 aug3.g5477 LOC107453428 0
LOC107453427 Ptep1.0/2.0 NW_024969747.1 66908 72381 + uncharacterized LOC107453427 aug3.g5479 LOC107453427 0
LOC107441797 Ptep1.0/2.0 NW_024969768.1 1062671 1063876 + uncharacterized LOC107441797 aug3.g16132,aug3.g5474 LOC107441797 0
LOC107452456 Ptep1.0/2.0 NW_024970475.1 327327 338133 + gastrula zinc finger protein XlCGF7.1 aug3.g10035,aug3.g22962,aug3.g21471,aug3.g17555,aug3.g27741,aug3.g23456,aug3.g5478,aug3.g16507,aug3.g14632,aug3.g15597 LOC107452456 0
LOC107443845 Ptep1.0/2.0 NW_024970584.1 166164 198882 - uncharacterized LOC107443845 aug3.g547 LOC107443845 0
LOC122271392 Ptep1.0/2.0 NW_024970771.1 91019 93153 + uncharacterized LOC122271392 aug3.g24022,aug3.g5475 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02