Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107450737 Ptep1.0/2.0 NW_024969643.1 1612894 1763763 + glycoprotein 3-alpha-L-fucosyltransferase A aug3.g3561,aug3.g5659 LOC107450737 0
LOC122271649 Ptep1.0/2.0 NW_024969643.1 1819284 2217690 - low-density lipoprotein receptor-related protein 4-like aug3.g5657,aug3.g5658 NA 0
LOC107443881 Ptep1.0/2.0 NW_024969903.1 100706 108849 + insulin-induced gene 1 protein aug3.g565 LOC107443881 0
LOC107453647 Ptep1.0/2.0 NW_024970406.1 230005 236203 - probable E3 ubiquitin-protein ligase HERC4 aug3.g5650 LOC107453647 0
LOC107453645 Ptep1.0/2.0 NW_024970406.1 236284 261808 + splicing factor 3A subunit 3 aug3.g5651 LOC107453645 0
LOC107453648 Ptep1.0/2.0 NW_024970406.1 269946 296034 - M-phase phosphoprotein 8 aug3.g5652 LOC107453648 0
LOC107453639 Ptep1.0/2.0 NW_024970406.1 308841 348859 - major facilitator superfamily domain-containing protein 12 aug3.g5653 LOC107453639 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02