Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453664 Ptep1.0/2.0 NW_024969708.1 1514864 1534227 + uncharacterized LOC107453664 aug3.g5680 LOC107453664 0
LOC107453673 Ptep1.0/2.0 NW_024969708.1 1555456 1629739 - uncharacterized LOC107453673 aug3.g5681 LOC107453673 0
LOC107453669 Ptep1.0/2.0 NW_024969708.1 1614179 1704182 + uncharacterized LOC107453669 aug3.g5682 LOC107453669 0
LOC107453665 Ptep1.0/2.0 NW_024969708.1 1706617 1809646 - cytosolic purine 5'-nucleotidase aug3.g5683 LOC107453665 0
LOC107456902 Ptep1.0/2.0 NW_024969708.1 1841289 2005694 + homeobox protein dve-1 aug3.g8928,aug3.g5686 LOC107456902 0
LOC107453678 Ptep1.0/2.0 NW_024969760.1 1010092 1041782 + protein Mo25-like aug3.g5687 LOC107453678 0
LOC107438137 Ptep1.0/2.0 NW_024969793.1 699616 824568 + formin-J-like aug3.g26411,aug3.g15945,aug3.g16965,aug3.g18789,aug3.g3845,aug3.g20638,aug3.g27431,aug3.g11569,aug3.g26749,aug3.g13556,aug3.g568,aug3.g15812,aug3.g22828,aug3.g12149,aug3.g5637,aug3.g892,aug3.g8296,aug3.g18962,aug3.g6082,aug3.g24558,aug3.g9808,aug3.g2790,a LOC107438137 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02