Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443986 Ptep1.0/2.0 NW_024969708.1 1334 25885 + max-like protein X aug3.g599 LOC107443986 0
LOC122270642 Ptep1.0/2.0 NW_024970296.1 284941 287681 + uncharacterized LOC122270642 aug3.g5997,aug3.g4970 NA 0
LOC107453102 Ptep1.0/2.0 NW_024970296.1 300836 310489 - uncharacterized LOC107453102 aug3.g5998 LOC107453102 0
LOC107454062 Ptep1.0/2.0 NW_024970563.1 151276 159388 + splicing factor 3A subunit 2 aug3.g5990 LOC107454062 0
LOC107454064 Ptep1.0/2.0 NW_024970563.1 189975 206826 - alpha-aspartyl dipeptidase aug3.g5992 LOC107454064 0
LOC107454059 Ptep1.0/2.0 NW_024970563.1 245879 325560 - potassium channel subfamily K member 13-like aug3.g5994 LOC107454059 0
LOC107452745 Ptep1.0/2.0 NW_024971260.1 18436 23755 + histone chaperone ASF1-like aug3.g4971,aug3.g21876,aug3.g5998 LOC107452745 0
LOC107454063 Ptep1.0/2.0 NW_024971476.1 26076 42679 + synaptosomal-associated protein 25 aug3.g5995 LOC107454063 0
LOC122272178 Ptep1.0/2.0 NW_024971593.1 39405 54806 - cold and drought-regulated protein CORA-like aug3.g5999,aug3.g4972 NA 0
LOC107454071 Ptep1.0/2.0 NW_024971976.1 15258 26342 + protein PFC0760c-like aug3.g5998 LOC107454071 0
LOC122272431 Ptep1.0/2.0 NW_024971997.1 36621 40190 - secreted acidic protein 2-like aug3.g5998 NA 0
LOC122273138 Ptep1.0/2.0 NW_024974342.1 1482 6976 - alpha-aspartyl dipeptidase-like aug3.g5992 LOC107454064 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02