Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454480 Ptep1.0/2.0 NW_024969617.1 804655 827056 - short transient receptor potential channel 4-like aug3.g6317 LOC107454480 0
LOC107454483 Ptep1.0/2.0 NW_024969617.1 834391 841998 - uncharacterized LOC107454483 aug3.g6318 LOC107454483 0
LOC107454481 Ptep1.0/2.0 NW_024969617.1 863965 1001902 - nephrin aug3.g6319 LOC107454481,LOC107454482 0
LOC107446833 Ptep1.0/2.0 NW_024969981.1 144401 168699 + cold shock domain-containing protein E1 aug3.g6313,aug3.g19427 LOC107446833 0
LOC107454479 Ptep1.0/2.0 NW_024969981.1 172331 186019 + DEP domain-containing protein 7 aug3.g6312,aug3.g22285 LOC107454479 0
LOC107454476 Ptep1.0/2.0 NW_024969981.1 208129 212226 + uncharacterized LOC107454476 aug3.g6311 LOC107454476 0
LOC107444127 Ptep1.0/2.0 NW_024970678.1 215403 264015 - scoloptoxin SSD14 aug3.g631 LOC107444127 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02