Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444181 Ptep1.0/2.0 NW_024969828.1 573643 599211 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 aug3.g642 LOC107444181 0
LOC107454609 Ptep1.0/2.0 NW_024970415.1 97970 223500 + genetic suppressor element 1 aug3.g6422,aug3.g6423 LOC107454609 0
LOC107454610 Ptep1.0/2.0 NW_024970415.1 225971 246302 - techylectin-5A aug3.g6421 LOC107454610 0
LOC107454607 Ptep1.0/2.0 NW_024970415.1 254774 276716 - gem-associated protein 8 aug3.g6420 LOC107454607 0
LOC107454616 Ptep1.0/2.0 NW_024970567.1 961 41688 + uncharacterized LOC107454616 aug3.g6429 LOC107454616 0
LOC107454614 Ptep1.0/2.0 NW_024970567.1 87311 155233 - growth/differentiation factor 8 aug3.g6428 LOC107454614 0
LOC107454612 Ptep1.0/2.0 NW_024970567.1 226528 228996 + nicotinamidase-like aug3.g6427 LOC107454612 0
LOC107454618 Ptep1.0/2.0 NW_024970567.1 235337 260945 - probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial aug3.g6426 LOC107454618 0
LOC107454615 Ptep1.0/2.0 NW_024970567.1 261054 291472 + AP-5 complex subunit mu-1 aug3.g6425 LOC107454615 0
LOC107454613 Ptep1.0/2.0 NW_024970567.1 293647 340289 - uncharacterized LOC107454613 aug3.g20632,aug3.g6424 LOC107454613 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02