Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454700 Ptep1.0/2.0 NW_024969777.1 428040 443970 + clotting factor G beta subunit aug3.g6464 LOC107454700 0
LOC110281924 Ptep1.0/2.0 NW_024969777.1 469843 612682 + triadin aug3.g6466,aug3.g6465 LOC110281924 0
LOC107454702 Ptep1.0/2.0 NW_024969777.1 613865 736808 - KICSTOR complex protein SZT2 aug3.g6467 LOC107454702 0
LOC107454704 Ptep1.0/2.0 NW_024969777.1 740393 757820 + uncharacterized LOC107454704 aug3.g6468 LOC107454704 0
LOC107444189 Ptep1.0/2.0 NW_024969828.1 417977 467818 + uncharacterized LOC107444189 aug3.g646 LOC107444189 0
LOC122270550 Ptep1.0/2.0 NW_024970235.1 749999 751495 - uncharacterized LOC122270550 aug3.g12760,aug3.g6469,aug3.g21842 NA 0
LOC107454693 Ptep1.0/2.0 NW_024970788.1 3922 65247 + retinoblastoma-like protein 1 aug3.g6461 LOC107454693 0
LOC107454695 Ptep1.0/2.0 NW_024970788.1 86581 139042 - breast cancer anti-estrogen resistance protein 1 aug3.g6460 LOC107454695 0
LOC107454690 Ptep1.0/2.0 NW_024970806.1 176221 189773 - arrestin domain-containing protein 4 aug3.g6463 LOC107454690 0
LOC107454694 Ptep1.0/2.0 NW_024970806.1 205884 232143 + uncharacterized LOC107454694 aug3.g6462 LOC107454694 0
LOC122272215 Ptep1.0/2.0 NW_024971642.1 11092 21708 - uncharacterized LOC122272215 aug3.g6467 NA 6e-138
LOC107451925 Ptep1.0/2.0 NW_024971835.1 3090 18253 + uncharacterized LOC107451925 aug3.g6467 LOC107451925 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02