Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442669 Ptep1.0/2.0 NW_024969656.1 1688934 1705951 - uncharacterized LOC107442669 aug3.g6599 LOC107442669 5e-150
LOC122269189 Ptep1.0/2.0 NW_024969755.1 6657 10124 - uncharacterized LOC122269189 aug3.g6597 NA 4e-29
LOC107442911 Ptep1.0/2.0 NW_024969884.1 498793 608984 + Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g16920,aug3.g659 LOC107442911 0
LOC122270765 Ptep1.0/2.0 NW_024970359.1 298010 298456 + uncharacterized LOC122270765 aug3.g6596 NA 0
LOC107454847 Ptep1.0/2.0 NW_024970359.1 316924 323706 + uncharacterized LOC107454847 aug3.g6597 LOC107454847 1e-78
LOC107454845 Ptep1.0/2.0 NW_024970359.1 357321 363260 + uncharacterized LOC107454845 aug3.g6599 LOC107454845 0
LOC107455141 Ptep1.0/2.0 NW_024971121.1 33013 149593 + pseudogene aug3.g6852,aug3.g6853,aug3.g5152,aug3.g13817,aug3.g27437,aug3.g2443,aug3.g815,aug3.g18721,aug3.g27682,aug3.g6591,aug3.g9034,aug3.g23308,aug3.g8240,aug3.g11539,aug3.g15522,aug3.g5586,aug3.g5083,aug3.g10191,aug3.g3609,aug3.g22834,aug3.g17162,aug3.g27259,aug LOC107455141 0
LOC107455237 Ptep1.0/2.0 NW_024971239.1 105522 106328 - uncharacterized LOC107455237 aug3.g6932,aug3.g6596 LOC107455237 0
LOC107440202 Ptep1.0/2.0 NW_024973948.1 473 3237 - uncharacterized LOC107440202 aug3.g14340,aug3.g14773,aug3.g6598,aug3.g23440,aug3.g24567,aug3.g21435 LOC107440202 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02