Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454917 Ptep1.0/2.0 NW_024969594.1 2071602 2134194 - sialin-like aug3.g6674 LOC107454917 0
LOC107454919 Ptep1.0/2.0 NW_024969594.1 2134219 2134955 - NPC intracellular cholesterol transporter 2 homolog a aug3.g6676 LOC107454919 0
LOC107454909 Ptep1.0/2.0 NW_024969594.1 2143614 2150764 + NPC intracellular cholesterol transporter 2-like aug3.g6677 LOC107454909 0
LOC107454910 Ptep1.0/2.0 NW_024969594.1 2155588 2156031 - ecdysteroid-regulated 16 kDa protein-like aug3.g6679 LOC107454910 0
LOC107454903 Ptep1.0/2.0 NW_024969704.1 557348 866929 - synaptogenesis protein syg-2 aug3.g6671 LOC107454903 0
LOC107444218 Ptep1.0/2.0 NW_024970488.1 224449 238076 - 28S ribosomal protein S18c, mitochondrial aug3.g667 LOC107444218 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02