Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444384 Ptep1.0/2.0 NW_024969602.1 957662 998523 - polycystin-2 aug3.g699 LOC107444384 0
LOC107455305 Ptep1.0/2.0 NW_024969621.1 364079 366038 - uncharacterized LOC107455305 aug3.g6995 LOC107455305 0
LOC122270192 Ptep1.0/2.0 NW_024969621.1 546001 549110 + peptidyl-prolyl cis-trans isomerase G-like aug3.g6996 NA 0
LOC107455298 Ptep1.0/2.0 NW_024970555.1 152184 160336 + 60S ribosomal protein L13a aug3.g6990 LOC107455298 0
LOC107455293 Ptep1.0/2.0 NW_024970555.1 163235 188116 + uncharacterized LOC107455293 aug3.g6991 LOC107455293,LOC107455296 0
LOC107455294 Ptep1.0/2.0 NW_024970555.1 211327 296471 - LIM/homeobox protein Lhx9-like aug3.g6992 LOC107455294 0
LOC107455295 Ptep1.0/2.0 NW_024970555.1 307964 316741 - uncharacterized LOC107455295 aug3.g6993,aug3.g23914 LOC107455295 0
LOC107453940 Ptep1.0/2.0 NW_024970555.1 327909 335634 - uncharacterized LOC107453940 aug3.g6993 LOC107453940 0
LOC107449320 Ptep1.0/2.0 NW_024972622.1 339 6911 + uncharacterized LOC107449320 aug3.g20692,aug3.g6993,aug3.g6994 LOC107449320 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02