Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444388 Ptep1.0/2.0 NW_024969602.1 821869 830009 - F-actin-capping protein subunit alpha aug3.g704 LOC107444388 0
LOC107436925 Ptep1.0/2.0 NW_024969633.1 830300 847743 - N-acetyltransferase ESCO2 aug3.g7049 LOC107436925 0
LOC107436934 Ptep1.0/2.0 NW_024969633.1 856305 864741 - uncharacterized LOC107436934 aug3.g7047 LOC107436934 0
LOC107436933 Ptep1.0/2.0 NW_024969633.1 894383 900641 - uncharacterized LOC107436933 aug3.g7046 LOC107436933 0
LOC107436932 Ptep1.0/2.0 NW_024969633.1 911339 918939 - uncharacterized LOC107436932 aug3.g7044,aug3.g7045 LOC107436932 0
LOC107436945 Ptep1.0/2.0 NW_024969633.1 940276 982924 + glutamate receptor 1 aug3.g7043,aug3.g23291 LOC107439939,LOC107436945 0
LOC107436944 Ptep1.0/2.0 NW_024969633.1 987693 995228 - piwi-like protein Ago3 aug3.g7042 LOC107436944 0
LOC107436943 Ptep1.0/2.0 NW_024969633.1 997823 1013335 + ras-related GTP-binding protein C aug3.g7041,aug3.g11932 LOC107436943 0
LOC107436942 Ptep1.0/2.0 NW_024969633.1 1030481 1048195 + U11/U12 small nuclear ribonucleoprotein 48 kDa protein aug3.g7040 LOC107436942 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02