Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441962 Ptep1.0/2.0 NW_024969626.1 335724 354589 - ADP-ribose glycohydrolase ARH3-like aug3.g7259,aug3.g7260 LOC107441962 0
LOC107442006 Ptep1.0/2.0 NW_024969626.1 356088 373061 - ADP-ribose glycohydrolase ARH3 aug3.g7259 LOC107442006 0
LOC107441972 Ptep1.0/2.0 NW_024969626.1 454781 470980 + uncharacterized LOC107441972 aug3.g7258 LOC107441972 0
LOC122270494 Ptep1.0/2.0 NW_024969626.1 509401 519304 - tyrosine-protein kinase transmembrane receptor Ror-like aug3.g7257 LOC107442001 0
LOC107442001 Ptep1.0/2.0 NW_024969626.1 528422 744101 - inactive tyrosine-protein kinase transmembrane receptor ROR1 aug3.g7257 LOC107442001 0
LOC107442003 Ptep1.0/2.0 NW_024969626.1 817833 831680 - PP2C-like domain-containing protein CG9801 aug3.g7256 LOC107442003 0
LOC107442004 Ptep1.0/2.0 NW_024969626.1 831775 837380 + oocyte zinc finger protein XlCOF26 aug3.g7255 LOC107442004 0
LOC107442007 Ptep1.0/2.0 NW_024969626.1 838007 858538 - FGGY carbohydrate kinase domain-containing protein aug3.g7254,aug3.g16638 LOC107442007 0
LOC107442000 Ptep1.0/2.0 NW_024969647.1 1008799 1020988 - geminin aug3.g7252 LOC107442000 0
LOC107441998 Ptep1.0/2.0 NW_024969647.1 1021206 1045714 + U4/U6 small nuclear ribonucleoprotein Prp4 aug3.g7251 LOC107441998 0
LOC107444483 Ptep1.0/2.0 NW_024971956.1 164661 203396 - nose resistant to fluoxetine protein 6-like aug3.g725 LOC107444483 0
LOC107441961 Ptep1.0/2.0 NW_024972560.1 11047 12152 + uncharacterized LOC107441961 aug3.g7253 LOC107441961 0
LOC122273939 Ptep1.0/2.0 NW_024984163.1 1398 1920 + uncharacterized LOC122273939 aug3.g7253 NA 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02