Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444554 Ptep1.0/2.0 NW_024969661.1 1232148 1240114 + ELAV-like protein 1 aug3.g757 LOC107444554 0
LOC107446647 Ptep1.0/2.0 NW_024969898.1 3913218 3948031 + peroxisomal trans-2-enoyl-CoA reductase aug3.g7570,aug3.g7571 LOC107446647 0
LOC107446648 Ptep1.0/2.0 NW_024969898.1 3956674 3983357 + peroxisomal trans-2-enoyl-CoA reductase aug3.g7571 LOC107446648 0
LOC107446649 Ptep1.0/2.0 NW_024969898.1 3985310 4109736 - cadherin EGF LAG seven-pass G-type receptor 2 aug3.g7572 LOC107446649 0
LOC107446665 Ptep1.0/2.0 NW_024969898.1 4160944 4211317 + WD repeat-containing protein 35 aug3.g7573 LOC107446665 0
LOC107446670 Ptep1.0/2.0 NW_024969898.1 4218330 4233085 + uncharacterized LOC107446670 aug3.g7574 LOC107446670 0
LOC107446659 Ptep1.0/2.0 NW_024969898.1 4241601 4262222 + pituitary tumor-transforming gene 1 protein-interacting protein aug3.g7575,aug3.g7576 LOC107446659 0
LOC107446646 Ptep1.0/2.0 NW_024969898.1 4381364 4509856 + poly [ADP-ribose] polymerase tankyrase-like aug3.g7577 LOC107446646 0
LOC122269700 Ptep1.0/2.0 NW_024969898.1 4525872 4585222 + uncharacterized LOC122269700 aug3.g7578 LOC107446668 2e-163
LOC107446668 Ptep1.0/2.0 NW_024969898.1 4612723 4721826 + Kv channel-interacting protein 4-like aug3.g7579 LOC107446668 0
LOC122273044 Ptep1.0/2.0 NW_024973836.1 3600 8295 - uncharacterized LOC122273044 aug3.g7575 NA 2e-129
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02