Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444600 Ptep1.0/2.0 NW_024969753.1 563945 570983 - uncharacterized LOC107444600 aug3.g766 LOC107444600 0
LOC107455341 Ptep1.0/2.0 NW_024969844.1 803066 826058 - pancreatic triacylglycerol lipase aug3.g7669 LOC107455341 0
LOC107455323 Ptep1.0/2.0 NW_024970759.1 34189 47916 + beta-1,3-galactosyltransferase 1 aug3.g7661 LOC107455323 0
LOC107455329 Ptep1.0/2.0 NW_024970759.1 62270 67811 - uncharacterized LOC107455329 aug3.g7660,aug3.g24441 LOC107455329 0
LOC107455321 Ptep1.0/2.0 NW_024970858.1 13068 20636 - superoxide dismutase [Mn] 2 aug3.g7662 LOC107455321 3e-100
LOC107455330 Ptep1.0/2.0 NW_024970858.1 20748 27311 + 60S ribosomal protein L6 aug3.g7663 LOC107455330 0
LOC107455325 Ptep1.0/2.0 NW_024970858.1 32264 51577 - epoxide hydrolase 1 aug3.g7664 LOC107455325 0
LOC107455326 Ptep1.0/2.0 NW_024970858.1 51559 64670 + AUGMIN subunit 1 aug3.g7665 LOC107455326 0
LOC107455327 Ptep1.0/2.0 NW_024970858.1 73386 74592 - PHD finger protein 7-like aug3.g7666 LOC107455327 0
LOC107455322 Ptep1.0/2.0 NW_024970858.1 74643 101481 + endoplasmic reticulum-Golgi intermediate compartment protein 3 aug3.g7667 LOC107455322 0
LOC107455324 Ptep1.0/2.0 NW_024970858.1 104236 122096 - tribbles homolog 2 aug3.g7668 LOC107455324 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02