Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455369 Ptep1.0/2.0 NW_024969617.1 1165106 1187895 + protein pelota aug3.g7709 LOC107455369 0
LOC107455374 Ptep1.0/2.0 NW_024969617.1 1188526 1222002 - monocarboxylate transporter 13 aug3.g7708 LOC107455374 0
LOC122269951 Ptep1.0/2.0 NW_024969617.1 1234469 1239022 + uncharacterized LOC122269951 aug3.g10209,aug3.g7707 NA 0
LOC107455372 Ptep1.0/2.0 NW_024969617.1 1255211 1317220 - protein MLP1 aug3.g7706,aug3.g21335 LOC107455372,LOC107455876 0
LOC107455373 Ptep1.0/2.0 NW_024969617.1 1375032 1401209 + NADPH--cytochrome P450 reductase aug3.g7705 LOC107455373 0
LOC107444618 Ptep1.0/2.0 NW_024969753.1 513658 518171 - transcription factor MafG aug3.g770 LOC107444618 0
LOC107447194 Ptep1.0/2.0 NW_024969890.1 896526 910480 - nose resistant to fluoxetine protein 6-like aug3.g7704 LOC107447194 0
LOC107455353 Ptep1.0/2.0 NW_024970922.1 75621 83374 + nose resistant to fluoxetine protein 6-like aug3.g7702 LOC107455353 0
LOC107455352 Ptep1.0/2.0 NW_024970922.1 110002 148806 + nose resistant to fluoxetine protein 6-like aug3.g7704,aug3.g13887,aug3.g7696 LOC107455352 0
LOC122271547 Ptep1.0/2.0 NW_024970922.1 171558 175441 + uncharacterized LOC122271547 aug3.g7704 LOC107455352 0
LOC107437648 Ptep1.0/2.0 NW_024971585.1 25570 75445 + nose resistant to fluoxetine protein 6-like aug3.g1012,aug3.g12484,aug3.g19662,aug3.g7704,aug3.g13889,aug3.g7700 LOC107437648 0
LOC122272693 Ptep1.0/2.0 NW_024972533.1 3048 4427 + uncharacterized LOC122272693 aug3.g7704 NA 0
LOC122272709 Ptep1.0/2.0 NW_024972575.1 5734 20980 - nose resistant to fluoxetine protein 6-like aug3.g7704 NA 0
LOC107444018 Ptep1.0/2.0 NW_024976148.1 704 4434 + protein pelota homolog aug3.g24517,aug3.g7709 LOC107444018 0
LOC122274058 Ptep1.0/2.0 NW_024989744.1 521 996 - centromere protein F-like aug3.g7706 LOC107455372 0
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02