Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455456 Ptep1.0/2.0 NW_024969737.1 13248 59460 - delta-1-pyrroline-5-carboxylate synthase aug3.g7791 LOC107455456 0
LOC107455454 Ptep1.0/2.0 NW_024969737.1 84662 124779 + zinc finger FYVE domain-containing protein 9 aug3.g7790 LOC107455454 0
LOC107444629 Ptep1.0/2.0 NW_024969753.1 214060 223478 - ATP synthase subunit C lysine N-methyltransferase aug3.g779 LOC107444629 0
LOC107455483 Ptep1.0/2.0 NW_024969794.1 667 30296 - motile sperm domain-containing protein 2 aug3.g7794 LOC107455483 0
LOC107455481 Ptep1.0/2.0 NW_024969794.1 45945 46767 + sperm flagellar protein 1-like aug3.g7796 LOC107455481 0
LOC107455482 Ptep1.0/2.0 NW_024969794.1 60441 234826 - lachesin aug3.g7797 LOC107455482 0
LOC122269346 Ptep1.0/2.0 NW_024969794.1 289964 291247 + glutamate [NMDA] receptor subunit 1-like aug3.g7798 NA 0
LOC107455486 Ptep1.0/2.0 NW_024969794.1 295809 345726 - uncharacterized LOC107455486 aug3.g7799,aug3.g7798 LOC107455486 0
LOC107441662 Ptep1.0/2.0 NW_024969888.1 196784 198948 - L-asparaginase-like aug3.g16034,aug3.g7792 LOC107441662 0
LOC107452038 Ptep1.0/2.0 NW_024970065.1 760319 786746 + delta-1-pyrroline-5-carboxylate synthase aug3.g4466,aug3.g7791 LOC107452038 0
LOC107455457 Ptep1.0/2.0 NW_024970436.1 7473 50883 + L-asparaginase aug3.g7792 LOC107455457 0
LOC107455455 Ptep1.0/2.0 NW_024970436.1 65480 342363 - E3 ubiquitin-protein ligase HUWE1 aug3.g7793 LOC107455455 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02