Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444656 Ptep1.0/2.0 NW_024969724.1 478956 499984 - alpha-latrocrustotoxin-Lt1a aug3.g25595,aug3.g25593,aug3.g7859,aug3.g25591 LOC107444672,LOC107444656 0
LOC107444799 Ptep1.0/2.0 NW_024969724.1 554484 571374 - delta-latroinsectotoxin-Lt1a aug3.g25590,aug3.g25589,aug3.g25588,aug3.g25592,aug3.g7858 LOC107444799 0
LOC107455541 Ptep1.0/2.0 NW_024969728.1 904468 905927 + delta-latroinsectotoxin-Lt1a-like aug3.g7859 LOC107455541 0
LOC107455559 Ptep1.0/2.0 NW_024969728.1 941783 960735 + integrin-linked kinase-associated serine/threonine phosphatase 2C aug3.g7856 LOC107455559 0
LOC122269068 Ptep1.0/2.0 NW_024969728.1 966560 973341 - uncharacterized LOC122269068 aug3.g7855 NA 0
LOC107455554 Ptep1.0/2.0 NW_024969728.1 973522 1017330 + integrator complex subunit 7 aug3.g7854 LOC107455554 0
LOC107455553 Ptep1.0/2.0 NW_024969728.1 1032016 1065437 - metastasis-associated protein MTA3 aug3.g7853 LOC107455553 0
LOC107455556 Ptep1.0/2.0 NW_024969728.1 1076021 1104604 - arginine-glutamic acid dipeptide repeats protein aug3.g7852 LOC107455556,LOC107455564 0
LOC107455563 Ptep1.0/2.0 NW_024969728.1 1104858 1114213 + transmembrane emp24 domain-containing protein 10 aug3.g7851 LOC107455563 0
LOC107455560 Ptep1.0/2.0 NW_024969728.1 1122789 1147381 + cell division control protein 42 homolog aug3.g7849,aug3.g7850 LOC107455560 0
LOC107444631 Ptep1.0/2.0 NW_024970311.1 292001 302460 + centromere protein S aug3.g785 LOC107444631 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02