Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444740 Ptep1.0/2.0 NW_024969596.1 556316 823623 + dual specificity protein kinase splA aug3.g825,aug3.g826 LOC107444740,LOC107444739 0
LOC107457554 Ptep1.0/2.0 NW_024969962.1 435343 512559 - CAP-Gly domain-containing linker protein 1 aug3.g25955,aug3.g8252 LOC107457554 0
LOC122269871 Ptep1.0/2.0 NW_024969962.1 523694 527366 - protein SSUH2 homolog aug3.g8253 LOC107456051 0
LOC107456051 Ptep1.0/2.0 NW_024969962.1 533837 548052 - protein SSUH2 homolog aug3.g8253 LOC107456051 0
LOC107456052 Ptep1.0/2.0 NW_024969962.1 553717 569211 - protein SSUH2 homolog aug3.g8254 LOC107456052 0
LOC107456039 Ptep1.0/2.0 NW_024969962.1 574750 586575 - glutathione S-transferase 1-1-like aug3.g8255 LOC107456039 0
LOC107456037 Ptep1.0/2.0 NW_024969962.1 588773 604791 - protein SSUH2 homolog aug3.g8256 LOC107456037 0
LOC107450178 Ptep1.0/2.0 NW_024969962.1 612705 642966 - protein SSUH2 homolog aug3.g21116,aug3.g8259 LOC107450178,LOC107456046 0
LOC107456045 Ptep1.0/2.0 NW_024969962.1 647854 651895 - uncharacterized LOC107456045 aug3.g8258 LOC107456045 0
LOC107456040 Ptep1.0/2.0 NW_024969962.1 655362 676797 - protein SSUH2 homolog aug3.g8259 LOC107456049,LOC107456040 0
LOC107456036 Ptep1.0/2.0 NW_024969962.1 684786 706739 - protein SSUH2 homolog aug3.g8259,aug3.g21748 LOC107456036 0
LOC107456035 Ptep1.0/2.0 NW_024970085.1 525831 557278 + homeobox protein B-H1 aug3.g8250 LOC107456035 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02