Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444844 Ptep1.0/2.0 NW_024969601.1 520078 548512 - protein giant-lens aug3.g839 LOC107444844 0
LOC107456223 Ptep1.0/2.0 NW_024969691.1 1410927 1412473 + uncharacterized LOC107456223 aug3.g8391,aug3.g1842 LOC107456223 0
LOC107438066 Ptep1.0/2.0 NW_024970288.1 397341 402147 + uncharacterized LOC107438066 aug3.g3482,aug3.g23092,aug3.g22513,aug3.g8392 LOC107438066 0
LOC107456227 Ptep1.0/2.0 NW_024970306.1 21329 76787 - glycerol-3-phosphate dehydrogenase, mitochondrial aug3.g8396 LOC107456227 0
LOC107456224 Ptep1.0/2.0 NW_024970306.1 99650 491051 - cAMP-dependent protein kinase catalytic subunit 1 aug3.g8395 LOC107456224 0
LOC122270660 Ptep1.0/2.0 NW_024970306.1 509079 510445 + pseudogene aug3.g8391 NA 0
LOC110283342 Ptep1.0/2.0 NW_024970328.1 400007 401263 - uncharacterized LOC110283342 aug3.g8391 LOC110283342 0
LOC122271270 Ptep1.0/2.0 NW_024970685.1 132977 133478 - pseudogene aug3.g8391 NA 0
LOC107456229 Ptep1.0/2.0 NW_024972167.1 5622 16725 + uncharacterized LOC107456229 aug3.g8398 LOC107456229 0
LOC107456228 Ptep1.0/2.0 NW_024972167.1 30545 31840 - chromatin target of PRMT1 protein aug3.g8397 LOC107456228 0
LOC122273183 Ptep1.0/2.0 NW_024974589.1 70 2799 + uncharacterized LOC122273183 aug3.g8392,aug3.g13824 NA 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02