Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444845 Ptep1.0/2.0 NW_024969601.1 454090 480500 - uncharacterized LOC107444845 aug3.g840 LOC107444845 0
LOC107449318 Ptep1.0/2.0 NW_024969767.1 776550 898345 + hemicentin-2 aug3.g8400,aug3.g26809 LOC107449318,LOC107439454 0
LOC107443645 Ptep1.0/2.0 NW_024969931.1 302614 394136 - zinc finger protein 672 aug3.g8406,aug3.g17363 LOC107443645 0
LOC107439174 Ptep1.0/2.0 NW_024970106.1 1480198 1507433 - S-adenosylmethionine sensor upstream of mTORC1 aug3.g26701,aug3.g19126,aug3.g2982,aug3.g27260,aug3.g11936,aug3.g23713,aug3.g2296,aug3.g22406,aug3.g8408,aug3.g22914,aug3.g21080,aug3.g20545,aug3.g3761,aug3.g4881,aug3.g19704,aug3.g16522,aug3.g5565,aug3.g11212,aug3.g25515,aug3.g3769,aug3.g3195,aug3.g26523 LOC107439174 0
LOC107439131 Ptep1.0/2.0 NW_024970148.1 506033 507037 + uncharacterized LOC107439131 aug3.g13582,aug3.g8401,aug3.g583 LOC107439131 0
LOC107436246 Ptep1.0/2.0 NW_024970369.1 228242 231302 - uncharacterized protein K02A2.6-like aug3.g2679,aug3.g14204,aug3.g6022,aug3.g8402,aug3.g25985 LOC107436246 0
LOC122273416 Ptep1.0/2.0 NW_024975928.1 482 1165 - uncharacterized LOC122273416 aug3.g8404 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02