Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456793 Ptep1.0/2.0 NW_024969813.1 1014111 1123993 + T-box transcription factor TBX20 aug3.g8837 LOC107456793 0
LOC107456789 Ptep1.0/2.0 NW_024969813.1 1140096 1141339 - gastrula zinc finger protein XlCGF71.1-like aug3.g8838 LOC107456789 4e-48
LOC107456790 Ptep1.0/2.0 NW_024969813.1 1141472 1197191 + serine/threonine-protein kinase 11-interacting protein aug3.g8838,aug3.g18932 LOC107456790 0
LOC107456798 Ptep1.0/2.0 NW_024970273.1 222559 242116 + serine/arginine repetitive matrix protein 1 aug3.g8839 LOC107456798 0
LOC110281909 Ptep1.0/2.0 NW_024970558.1 1419 20861 - (S)-2-hydroxy-acid oxidase GLO2-like aug3.g8830 LOC110281909,LOC107456783 0
LOC107456785 Ptep1.0/2.0 NW_024970558.1 26250 87667 + putative fatty acyl-CoA reductase CG5065 aug3.g8831 LOC107456785 0
LOC107456784 Ptep1.0/2.0 NW_024970558.1 97523 128872 + putative fatty acyl-CoA reductase CG5065 aug3.g8832 LOC107456784 0
LOC107456788 Ptep1.0/2.0 NW_024970558.1 130461 153144 + uncharacterized LOC107456788 aug3.g8833 LOC107456788 0
LOC107456786 Ptep1.0/2.0 NW_024970558.1 156724 216124 - N-acetylglucosamine-1-phosphotransferase subunits alpha/beta aug3.g8834 LOC107456786 0
LOC107456787 Ptep1.0/2.0 NW_024970558.1 216404 280371 + liprin-beta-1 aug3.g8835 LOC107456787 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02