Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444933 Ptep1.0/2.0 NW_024969713.1 992457 1042067 + uncharacterized LOC107444933 aug3.g888 LOC107444933 0
LOC107456859 Ptep1.0/2.0 NW_024969914.1 304488 319827 - voltage-dependent anion-selective channel protein 2 aug3.g8889 LOC107456859 0
LOC107456861 Ptep1.0/2.0 NW_024969914.1 347722 349287 - DNA-binding protein HEXBP aug3.g8887 LOC107456861 0
LOC107456870 Ptep1.0/2.0 NW_024969914.1 358147 379802 + phosphoacetylglucosamine mutase aug3.g8886 LOC107456870 0
LOC107456851 Ptep1.0/2.0 NW_024969914.1 383021 397859 + uncharacterized LOC107456851 aug3.g8885 LOC107456851 0
LOC107456858 Ptep1.0/2.0 NW_024969914.1 399687 407795 + uncharacterized LOC107456858 aug3.g8884 LOC107456858 0
LOC122268349 Ptep1.0/2.0 NW_024969914.1 409515 412897 - protein BANP-like aug3.g8883 LOC107456867 0
LOC107456867 Ptep1.0/2.0 NW_024969914.1 415170 421748 - uncharacterized LOC107456867 aug3.g8883 LOC107456867 1e-41
LOC107456866 Ptep1.0/2.0 NW_024969914.1 421650 440531 + cytoplasmic tRNA 2-thiolation protein 2 aug3.g8882 LOC107456866 0
LOC107456865 Ptep1.0/2.0 NW_024969914.1 444403 455438 - transcription initiation factor IIB aug3.g8881 LOC107456865 0
LOC107456850 Ptep1.0/2.0 NW_024969914.1 455627 463262 + ribosomal RNA processing protein 36 homolog aug3.g8880 LOC107456850 0
LOC107456849 Ptep1.0/2.0 NW_024969914.1 469615 509651 + protein Skeletor, isoforms B/C aug3.g8880,aug3.g23511 LOC107456849 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02