Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445113 Ptep1.0/2.0 NW_024969708.1 6249286 6261931 - uncharacterized LOC107445113 aug3.g919 LOC107445113 0
LOC107457210 Ptep1.0/2.0 NW_024970775.1 44976 141029 + CKLF-like MARVEL transmembrane domain-containing protein 4 aug3.g9199 LOC107457210 0
LOC107457204 Ptep1.0/2.0 NW_024970798.1 36253 46541 + protein MIX23 aug3.g9190 LOC107457204 0
LOC107457205 Ptep1.0/2.0 NW_024970798.1 51802 59674 - hepatoma-derived growth factor-related protein 2 aug3.g9191 LOC107457205 0
LOC107457202 Ptep1.0/2.0 NW_024970798.1 59941 110814 + trafficking protein particle complex subunit 11 aug3.g9193,aug3.g9194,aug3.g9192 LOC107457202 0
LOC107457203 Ptep1.0/2.0 NW_024970798.1 120817 125909 - probable serine/threonine-protein kinase HSL1 aug3.g9195 LOC107457203 0
LOC107457206 Ptep1.0/2.0 NW_024970798.1 175785 215157 + tropomyosin aug3.g9196,aug3.g9197 LOC107457206 0
LOC122273889 Ptep1.0/2.0 NW_024982596.1 988 2160 + trafficking protein particle complex subunit 11-like aug3.g9193 NA 1e-142
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02