Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269736 Ptep1.0/2.0 NW_024969911.1 752765 753669 + spore wall protein 2-like aug3.g9249 NA 3e-49
LOC122269737 Ptep1.0/2.0 NW_024969911.1 762009 765164 + serine-rich adhesin for platelets-like aug3.g9248 NA 0
LOC122270286 Ptep1.0/2.0 NW_024970120.1 516476 619308 + uncharacterized LOC122270286 aug3.g9246 LOC107445025 0
LOC107445025 Ptep1.0/2.0 NW_024970120.1 694215 754382 + glutamate receptor ionotropic, NMDA 2B aug3.g9246,aug3.g6279 LOC107445025 0
LOC107445422 Ptep1.0/2.0 NW_024970120.1 789391 804800 - uncharacterized LOC107445422 aug3.g9245 LOC107445422 0
LOC107445280 Ptep1.0/2.0 NW_024970120.1 810947 823552 - uncharacterized LOC107445280 aug3.g9244 LOC107445280 0
LOC107445192 Ptep1.0/2.0 NW_024970120.1 846449 856038 - uncharacterized LOC107445192 aug3.g9243 LOC107445192 0
LOC107445116 Ptep1.0/2.0 NW_024970731.1 57556 62268 - selenoprotein F-like aug3.g924 LOC107445116 0
LOC107445106 Ptep1.0/2.0 NW_024971409.1 12732 28800 - uncharacterized LOC107445106 aug3.g9240 LOC107445106 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02