Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445142 Ptep1.0/2.0 NW_024969631.1 1092844 1112328 - CAP-Gly domain-containing linker protein 4 aug3.g957 LOC107445142 0
LOC122270702 Ptep1.0/2.0 NW_024970324.1 116074 125698 + uncharacterized LOC122270702 aug3.g9579 NA 6e-105
LOC107438026 Ptep1.0/2.0 NW_024970324.1 132216 145554 + DNA repair protein complementing XP-A cells homolog aug3.g9577 LOC107438026 0
LOC107438015 Ptep1.0/2.0 NW_024970324.1 150825 183689 - growth arrest-specific protein 1 aug3.g9575 LOC107438015 0
LOC107438007 Ptep1.0/2.0 NW_024970324.1 263171 299222 - zinc finger RNA-binding protein aug3.g9573 LOC107438007 0
LOC107437998 Ptep1.0/2.0 NW_024970324.1 299370 319306 + myogenesis-regulating glycosidase aug3.g9572 LOC107437998 0
LOC107437987 Ptep1.0/2.0 NW_024970324.1 327647 339504 + toxin CSTX-20-like aug3.g9572 LOC107437987 0
LOC107437962 Ptep1.0/2.0 NW_024970324.1 342455 425034 - calcium homeostasis modulator protein 6 aug3.g9571,aug3.g10115,aug3.g9570 LOC107445249,LOC107437962 0
LOC107448080 Ptep1.0/2.0 NW_024971654.1 45080 46530 - uncharacterized LOC107448080 aug3.g18327,aug3.g9574,aug3.g27351,aug3.g20119 LOC107448080 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02