Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438411 Ptep1.0/2.0 NW_024970170.1 69469 307359 + roundabout homolog 1 aug3.g9591 LOC107438411 0
LOC107438420 Ptep1.0/2.0 NW_024970170.1 280830 283379 + ubiquitin-conjugating enzyme E2-24 kDa aug3.g9590 LOC107438420 0
LOC107438428 Ptep1.0/2.0 NW_024970170.1 308452 347885 - transcription initiation factor TFIID subunit 5 aug3.g9592,aug3.g21015 LOC107438428 0
LOC107440250 Ptep1.0/2.0 NW_024970518.1 363463 386671 + uncharacterized LOC107440250 aug3.g20967,aug3.g14385,aug3.g9598 LOC107440250 0
LOC107449224 Ptep1.0/2.0 NW_024970887.1 30670 48499 + ras-related protein Rab-34-like aug3.g959 LOC107449224,LOC107449225 8e-97
LOC107438478 Ptep1.0/2.0 NW_024971163.1 13967 46080 - protein MTO1 homolog, mitochondrial aug3.g9593 LOC107438478 0
LOC107438488 Ptep1.0/2.0 NW_024971163.1 40917 72670 + uncharacterized LOC107438488 aug3.g9594 LOC107438488 0
LOC107438457 Ptep1.0/2.0 NW_024971163.1 86512 135582 - caveolin-3-like aug3.g9595 LOC107438457 0
LOC107438447 Ptep1.0/2.0 NW_024971681.1 32974 62229 + DNA (cytosine-5)-methyltransferase 3B aug3.g9593,aug3.g17453 LOC107438475,LOC107438447 0
LOC107449845 Ptep1.0/2.0 NW_024972504.1 2277 21621 + uncharacterized LOC107449845 aug3.g20966,aug3.g9599 LOC107449845 0
LOC107438502 Ptep1.0/2.0 NW_024972548.1 3859 11255 + sulfotransferase ssu-1 aug3.g9596 LOC107438502 0
LOC122268226 Ptep1.0/2.0 NW_024972548.1 18542 21021 + sulfotransferase ssu-1-like aug3.g9597 LOC107445123 0
LOC107445123 Ptep1.0/2.0 NW_024972826.1 5392 20480 - sulfotransferase ssu-1-like aug3.g18318,aug3.g18317,aug3.g9597 LOC107445123 0
LOC122273209 Ptep1.0/2.0 NW_024974693.1 9535 12993 - uncharacterized LOC122273209 aug3.g959 NA 3e-66
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02